Atlas Query Templates
Status
- Workflow layer:
09_ai_workflows. - Purpose: reusable query templates for Wiki-RAG / LLM question answering over the ECC/SHCC/EGC Atlas.
- Grounding rule: every answer must cite at least one source path or claim-evidence row.
- Lab-positioning rule: if the query concerns Professor Bang Yeon Lee, Lee lab, 우리 연구, 교수님 논문, novelty, manuscript framing, or proposal positioning, retrieve from
06_lab_position/first.
General answer protocol
- Identify query type.
- Retrieve from the recommended targets in order.
- Use concept nodes for structure and claim-evidence rows for factual/numeric claims.
- Cite paths explicitly.
- If evidence is pending original PDF verification, say so.
- Do not invent page numbers, metrics, DOI values, or paper relationships.
1. Concept explanation
User question pattern
What is <concept>?
<concept>가 뭐야?
Explain <concept> simply.
학생에게 <concept>를 설명해줘.
Example:
PE/UHMWPE fiber가 extreme ductility에 유리한 이유는?
Retrieval targets
08_teaching/concept_explainers/- relevant
02_concepts/*.md - relevant
04_material_systems/*.md 07_visualization/*claim_evidence_matrix.csv- representative paper cards under
03_papers/
For PE/UHMWPE and extreme ductility:
02_concepts/extreme_ductility_ecc.md02_concepts/fiber_bridging_law.md05_experiments/single_fiber_pullout.md07_visualization/extreme_ductility_extension_claim_evidence_matrix.csv
Required evidence fields
- source_path or atlas_file
- claim
- evidence_excerpt_or_summary
- mechanism_category
- material_system
- fiber_type
- verification_level
Response format
Short answer
Intuitive explanation
Technical explanation
Evidence
Caution / common misunderstanding
Sources
Example answer skeleton
Short answer: PE/UHMWPE fibers are favorable for extreme ductility because they can provide strong but pullout-tolerant crack bridging, allowing many cracks to form before localization.
Intuitively, they act like many fine bridges across cracks. If the fibers pull out gradually rather than rupture abruptly, the composite can keep forming new cracks.
Technically, this supports PSH by maintaining bridging stress and complementary energy over crack opening. Fine fiber diameter also improves bridging-fiber number density, reducing weak-section variability.
Evidence: <cite Chen 2026 / Ding 2018 / Yu 2018 row from `extreme_ductility_extension_claim_evidence_matrix.csv`>.
Caution: high tensile strength alone is not enough; interface, diameter, dispersion, and matrix toughness must also be compatible.
2. Literature lineage
User question pattern
How did <topic> develop?
<topic> 연구 계보를 정리해줘.
<material/system>의 literature lineage를 보여줘.
Example:
Lee lab의 cementless EGC 연구는 global literature에서 어디에 위치하는가?
Retrieval targets
For general lineage:
index.md- relevant synthesis node, e.g.
02_concepts/extreme_ductility_ecc.mdor04_material_systems/green_ecc.md 07_visualization/graph_concept_to_concept_edges.csv- topic-specific claim-evidence matrix
- paper cards
For Lee lab lineage:
06_lab_position/our_lab_position_map.md07_visualization/lab_to_global_lineage_map.md- relevant positioning card under
06_lab_position/ 07_visualization/graph_lab_to_global_edges.csv07_visualization/by_lee_lab_publications_claim_evidence_matrix.csv
Required evidence fields
- paper_id
- year
- title
- atlas_node / atlas_file
- claim
- source_note
- paper_card
- relation from graph edge if available
Response format
Lineage summary
Timeline or staged list
Key mechanism shift at each stage
Lee lab position, if relevant
Evidence table
Example answer skeleton
The cementless EGC lineage can be framed as:
1. Global ECC micromechanics: PSH and fiber bridging define the design logic.
2. Green ECC transition: binder replacement becomes meaningful only if strain-hardening and crack-width control remain.
3. AAS/EGC branch: cementless slag and fly ash/geopolymer matrices are adapted to satisfy PSH.
4. Lee lab position: Lee 2012 establishes AAS feasibility; Choi 2016 and later studies extend PE/AAS and EGC systems toward ultra-ductility and sustainability.
Sources: `06_lab_position/alkali_activated_ultra_ductile_position.md`; `04_material_systems/green_ecc.md`; `07_visualization/by_lee_lab_publications_claim_evidence_matrix.csv`.
3. Compare material systems
User question pattern
Compare <system A> and <system B>.
<system A>와 <system B> 차이를 정리해줘.
Which is better for <goal>: <system A> or <system B>?
Example:
AAS-ECC와 geopolymer EGC를 비교해줘.
Retrieval targets
- relevant
04_material_systems/*.md 07_visualization/*claim_evidence_matrix.csv, filtered bymaterial_system06_lab_position/if Lee lab relevance is requested- representative paper cards
Required evidence fields
- material_system
- binder_type
- fiber_type
- test_method
- key_metric
- claim
- verification_level
- source path
Response format
Comparison table
Mechanism differences
Performance differences
Sustainability/durability implications
Use-case recommendation
Cited evidence
Example answer skeleton
| Aspect | AAS-ECC | Geopolymer EGC |
|---|---|---|
| Binder | alkali-activated slag | fly ash/slag/metakaolin geopolymer |
| Design issue | activator, rheology, interface | activator chemistry, curing, reaction products |
| Key performance | <metric from evidence row> | <metric from evidence row> |
Interpretation: both are cementless/low-carbon routes, but they differ in reaction chemistry and curing sensitivity.
Sources: `04_material_systems/green_ecc.md`; `04_material_systems/geopolymer_ecc.md`; relevant rows in `sustainable_ecc_extension_claim_evidence_matrix.csv` and `by_lee_lab_publications_claim_evidence_matrix.csv`.
4. Find evidence for a claim
User question pattern
Find evidence for <claim>.
<claim>을 뒷받침하는 논문/근거 찾아줘.
이 주장에 대한 source-grounded evidence를 정리해줘.
Example:
self-healing ECC에서 fiber bridging과 crack-width control의 역할은?
Retrieval targets
- claim-evidence matrices first:
-
07_visualization/foundational_papers_claim_evidence_matrix.csv-07_visualization/extreme_ductility_extension_claim_evidence_matrix.csv-07_visualization/sustainable_ecc_extension_claim_evidence_matrix.csv-07_visualization/by_lee_lab_publications_claim_evidence_matrix.csv - relevant concept/material nodes
- source notes for the selected rows
- paper cards for citation summary
Required evidence fields
- paper_id
- title
- year
- claim
- evidence_excerpt_or_summary
- page_or_section
- figure_table_equation
- status / verification_level
- source_note
- paper_card
Response format
Claim restatement
Evidence table
Synthesis paragraph
Verification caveat
Example answer skeleton
Claim: In self-healing ECC, crack-width control and fiber bridging provide the physical conditions for reliable healing.
| Evidence | Source | Verification |
|---|---|---|
| Fiber content governs permeability reduction... | `by_lee_lab_publications_claim_evidence_matrix.csv`, paper_id=`alemu_2023...` | verified_from_pdf / source-note status |
| Hybrid PE-PVA expands complete healing threshold... | `by_lee_lab_publications_claim_evidence_matrix.csv`, paper_id=`choi_2021...` | verified_from_pdf / source-note status |
Synthesis: The evidence suggests that healing is not only a chemical-additive problem. ECC microcracking and fiber bridging reduce flow and create sites for healing products.
5. Draft manuscript introduction
User question pattern
Draft an introduction for <topic>.
<topic> 논문 introduction 초안 써줘.
<topic> 배경과 novelty를 논문용으로 정리해줘.
Example:
recycled selvage fiber ECC의 novelty는 무엇인가?
Retrieval targets
- relevant
06_lab_position/*_position.md 07_visualization/lab_to_global_lineage_map.md- relevant material-system / concept node
- claim-evidence matrix rows with
priority_for_synthesis = high - paper cards for representative citations
Required evidence fields
- global literature anchor
- lab positioning sentence
- representative papers
- key metrics
- limitation / caution
- verification_level
Response format
Paragraph 1: broad problem
Paragraph 2: global literature status
Paragraph 3: gap / limitation
Paragraph 4: current study novelty
Evidence notes / citation placeholders
Example answer skeleton
Paragraph 1: ECC provides tensile ductility and crack-width control, but broad deployment is limited by fiber cost and embodied energy.
Paragraph 2: Prior Green ECC research uses SCMs, geopolymer binders, and recycled polymer fibers, but many recycled-fiber systems suffer performance loss.
Paragraph 3: The Lee lab selvage-fiber lineage shows that high-performance PE textile waste can retain bridging capacity when processed and dispersed properly.
Paragraph 4: Therefore, the current study is positioned as a circular-economy ECC route that preserves strain-hardening while reducing reliance on virgin fibers.
Sources: `06_lab_position/recycled_selvage_fiber_position.md`; `04_material_systems/green_ecc.md`; relevant rows in `by_lee_lab_publications_claim_evidence_matrix.csv`.
6. Draft discussion paragraph
User question pattern
Draft a discussion paragraph for <result>.
<result>를 literature와 연결해서 discussion 문단 써줘.
Example:
low-fiber EGC에서 EPS flaw design 결과를 discussion으로 연결해줘.
Retrieval targets
- relevant lab positioning card
- relevant concept node, especially mechanism nodes
- claim-evidence matrix rows for comparable metrics
- representative paper cards
Required evidence fields
- mechanism_category
- comparable metric
- prior study claim
- current result placeholder
- caution / limitation
Response format
Interpretation of current result
Connection to mechanism
Comparison to prior evidence
Limitation / caution
Forward-looking implication
Example answer skeleton
The result can be interpreted through flaw-design logic rather than as a simple strength reduction. In the ECC micromechanics framework, intentional flaws can help activate distributed cracking by lowering the local cracking threshold, provided that fiber bridging remains sufficient. This aligns with the Atlas flaw-design lineage and the Lee lab low-fiber EGC positioning. However, the claim should remain framed as `manuscript / draft` until the specific low-fiber EGC source files are ingested and verified.
Sources: `06_lab_position/low_fiber_egc_position.md`; `02_concepts/flaw_design.md`; `03_papers/wang_li_2004_tailoring_preexisting_flaws.md`.
7. Reviewer response support
User question pattern
Help respond to reviewer comment: <comment>
리뷰어 코멘트에 대응할 근거 찾아줘.
Reviewer says <claim>; how should we respond?
Retrieval targets
- claim-evidence matrix rows for factual rebuttal
- relevant source notes and paper cards
- lab positioning notes if novelty or contribution is challenged
- concept nodes for mechanism explanation
Required evidence fields
- reviewer issue type
- direct evidence row
- paper/source path
- whether evidence is PDF verified
- suggested response sentence
Response format
Reviewer concern
Evidence available in Atlas
Recommended response logic
Suggested response paragraph
Caution / what not to overclaim
Example answer skeleton
Reviewer concern: The reviewer questions whether recycled selvage fibers can maintain ECC tensile performance.
Evidence: Choi 2022 and Hwang 2025 rows in `by_lee_lab_publications_claim_evidence_matrix.csv` support tensile ductility and pullout behavior of selvage fiber systems.
Suggested response: We agree that recycled fibers often reduce performance; however, the present system uses PE-based selvage fibers, whose filament properties and pullout behavior differ from generic recycled polymer fibers...
Caution: Avoid saying all recycled fibers are suitable for ECC.
8. Proposal background
User question pattern
Draft proposal background for <topic>.
<topic> 연구재단 제안서 배경 써줘.
Example:
Wiki-RAG 기반 재료 배합 최적화 제안서 배경 써줘.
Retrieval targets
06_lab_position/materials_ai_wikirag_position.md09_ai_workflows/wiki_rag_ingestion_plan.md- relevant lab positioning cards
04_material_systems/green_ecc.md- claim-evidence matrices for examples
Required evidence fields
- problem statement
- current limitation
- source-grounded opportunity
- lab readiness
- expected outputs
- evidence paths
Response format
Problem
Need
Prior basis
Lee lab readiness
Proposed direction
Expected impact
Evidence notes
Example answer skeleton
Problem: ECC/EGC mixture design involves coupled binder, fiber, flaw, curing, and durability variables.
Need: Physical AI is premature without structured evidence and experiment data.
Prior basis: The Atlas already contains source-grounded matrices and lab-positioning maps.
Lee lab readiness: The lab corpus spans AAS/EGC, recycled fibers, self-healing, flaw design, and performance testing.
Proposed direction: Build a Wiki-RAG material design infrastructure that retrieves verified evidence and generates candidate mixture hypotheses for experimental validation.
Sources: `06_lab_position/materials_ai_wikirag_position.md`; `09_ai_workflows/wiki_rag_ingestion_plan.md`.
9. Teaching module generation
User question pattern
Generate a lecture module for <topic>.
학생용으로 <topic> 강의 모듈 만들어줘.
<topic> 개념 설명문 만들어줘.
Retrieval targets
08_teaching/lecture_modules/08_teaching/concept_explainers/- relevant concept node
- claim-evidence matrix rows for representative evidence
- paper cards for suggested reading
Required evidence fields
- learning objectives
- key concepts
- minimal theory
- evidence source paths
- representative papers
- linked nodes
Response format
Learning objectives
Key concepts
Minimal theory
Evidence
Representative papers
Discussion questions
Assignment idea
Linked nodes
Example answer skeleton
# Lecture Module: Fiber Bridging
Learning objectives:
- Explain fiber bridging after matrix cracking.
- Interpret pullout vs rupture.
Evidence:
- `02_concepts/fiber_bridging_law.md`
- `05_experiments/single_fiber_pullout.md`
- `07_visualization/foundational_papers_claim_evidence_matrix.csv`
10. Lab positioning query
User question pattern
Where does Lee lab's <topic> research sit in the global literature?
Lee lab의 <topic> 연구 positioning 정리해줘.
교수님 연구의 novelty claim을 만들어줘.
Examples:
Lee lab의 cementless EGC 연구는 global literature에서 어디에 위치하는가?
recycled selvage fiber ECC의 novelty는 무엇인가?
low-fiber EGC / EPS flaw design의 전략적 위치는?
Retrieval targets
Always retrieve from 06_lab_position/ first:
06_lab_position/our_lab_position_map.md- relevant positioning card:
-
06_lab_position/alkali_activated_ultra_ductile_position.md-06_lab_position/recycled_selvage_fiber_position.md-06_lab_position/self_healing_position.md-06_lab_position/low_fiber_egc_position.md-06_lab_position/materials_ai_wikirag_position.md 07_visualization/lab_to_global_lineage_map.md07_visualization/graph_lab_to_global_edges.csv07_visualization/by_lee_lab_publications_claim_evidence_matrix.csv- relevant global Atlas nodes
Required evidence fields
- lab research axis
- representative Lee lab papers
- global anchor node
- key evidence / metric
- publication status
- source path
- caution / overclaim limit
Response format
Positioning sentence
Global anchor
Lee lab contribution
Representative papers and evidence
Strategic novelty claim
Cautions
Reusable manuscript/proposal sentence
Sources
Example answer skeleton
Positioning sentence: Lee lab's cementless EGC research is positioned as a sustained transfer of ECC micromechanics into alkali-activated and geopolymer binder systems while preserving tensile strain-hardening and crack control.
Global anchor: Victor Li micromechanics and PSH criteria.
Lee lab contribution: Lee 2012 establishes AAS strain-hardening feasibility; subsequent PE-AAS and fly ash/geopolymer EGC studies extend the route toward high ductility, sustainability, and self-healing.
Strategic novelty claim: The lab's contribution is not binder substitution alone, but micromechanical adaptation of cementless binders to retain ECC functions.
Sources: `06_lab_position/alkali_activated_ultra_ductile_position.md`; `07_visualization/by_lee_lab_publications_claim_evidence_matrix.csv`; `04_material_systems/green_ecc.md`.